BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB024F03LP1|AL428244
(976 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1444 1452 0.0
3x_Contig1349 407 e-113
>3x_Contig1444
Length = 7580
Score = 1452 bits (731), Expect = 0.0
Identities = 731/731 (100%)
Strand = Plus / Minus
Query: 1 acattcctcttcatcacagttctgcgattgaggcccaccatgctctctagtgttcaacat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 732 acattcctcttcatcacagttctgcgattgaggcccaccatgctctctagtgttcaacat 673
Query: 61 actccggagtgagaacgaactcaaaacactctgtacagacatggttctggccctaggaac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 672 actccggagtgagaacgaactcaaaacactctgtacagacatggttctggccctaggaac 613
Query: 121 gactttctgcttctcaaaagtgatagtcgacttcgccgatttcatcgatgctattgacgt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 612 gactttctgcttctcaaaagtgatagtcgacttcgccgatttcatcgatgctattgacgt 553
Query: 181 ctcagacccatttctagacccatttccaacttctgcttgatttttcagttttccagtaca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 552 ctcagacccatttctagacccatttccaacttctgcttgatttttcagttttccagtaca 493
Query: 241 cgcagctggcacatcgacctcactggtctgagaatgaacgctgctcatctagtaaaattc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 492 cgcagctggcacatcgacctcactggtctgagaatgaacgctgctcatctagtaaaattc 433
Query: 301 aaacgacaaaagaaaaaaaaaaacccctggatgttatcttatactttataactcagacag 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 432 aaacgacaaaagaaaaaaaaaaacccctggatgttatcttatactttataactcagacag 373
Query: 361 acaatggaattacactcttctcttcacgattcaaaacacaatctttgaaaaaccaaatag 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 372 acaatggaattacactcttctcttcacgattcaaaacacaatctttgaaaaaccaaatag 313
Query: 421 aatacaatatagtgtgaaaagaatgaagcaaataccgtcttttcgtcctcctaaaatata 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 312 aatacaatatagtgtgaaaagaatgaagcaaataccgtcttttcgtcctcctaaaatata 253
Query: 481 atgaattagaacaaaactagtagaaacagtagtaataaaaaaaggcctccttccgtaaaa 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 252 atgaattagaacaaaactagtagaaacagtagtaataaaaaaaggcctccttccgtaaaa 193
Query: 541 aaatttttgaccaaaaaataaaaaaaagacaactgtataaccgaatgtcaacaagttctc 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 192 aaatttttgaccaaaaaataaaaaaaagacaactgtataaccgaatgtcaacaagttctc 133
Query: 601 cccagtgctccagaaacctgctaatggttgtgttattgaaattccttacgctatcacaag 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 132 cccagtgctccagaaacctgctaatggttgtgttattgaaattccttacgctatcacaag 73
Query: 661 atctttacaggatgattaaagaactagataaattatgggagtcaaggagaagtgactttc 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 72 atctttacaggatgattaaagaactagataaattatgggagtcaaggagaagtgactttc 13
Query: 721 taaaaagaagg 731
|||||||||||
Sbjct: 12 taaaaagaagg 2
>3x_Contig1349
Length = 5890
Score = 407 bits (205), Expect = e-113
Identities = 236/246 (95%), Gaps = 3/246 (1%)
Strand = Plus / Minus
Query: 731 gaaattatatttttttgtttttatcgaatccagtgttctgttctctctgtgaaaattgat 790
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5890 gaaattatatttttttgtttttatcgaatccagtgttctgttctctctgtgaaaattgat 5831
Query: 791 ttccaaaaattgaataatccgatgaaaattccgtattacttttccgagctttctcgctgc 850
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5830 ttccaaaaattgaataatccgatgaaaattccgtattacttttccgagctttctcgctgc 5771
Query: 851 tgcttactaccaaagggtcgctgtggctacgcrtcamtctggggtaaatcatcacttttt 910
|||||||||||||||||||||||||||||||| ||| |||||||||||||||||||
Sbjct: 5770 tgcttactaccaaagggtcgctgtggctacgcagtcatct-gggtaaatcatcacttttt 5712
Query: 911 tcccccttttgagattacgggtctttcattttctaaggagagacaaagggsgggtaacag 970
|||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 5711 --ccccctttgagattacgggtctttcattttctaaggagagacaaagggcgggtaacag 5654
Query: 971 agaagg 976
||||||
Sbjct: 5653 agaagg 5648
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 15,315
Number of Sequences: 1807
Number of extensions: 15315
Number of successful extensions: 224
Number of sequences better than 1.0e-20: 2
length of query: 976
length of database: 10,358,551
effective HSP length: 16
effective length of query: 960
effective length of database: 10,329,639
effective search space: 9916453440
effective search space used: 9916453440
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)